Loupe Browser on Badran Elshenawy https://badran-elshenawy.netlify.app/tags/loupe-browser/ Recent content in Loupe Browser on Badran Elshenawy Hugo en Fri, 04 Sep 2026 09:00:00 +0000 The Loupe Ecosystem – Post 3: Converting Seurat Objects With loupeR https://badran-elshenawy.netlify.app/posts/loupe-ecosystem-post-3-louper-seurat-conversion/ Fri, 04 Sep 2026 09:00:00 +0000 https://badran-elshenawy.netlify.app/posts/loupe-ecosystem-post-3-louper-seurat-conversion/ One function call turns six weeks of integration and annotation into a file your PI can double click. Plus the six constraints nobody documents well. The Loupe Ecosystem – Post 2: That .cloupe File Has Been in Your outs Folder This Whole Time https://badran-elshenawy.netlify.app/posts/loupe-ecosystem-post-2-loupe-browser-capabilities/ Wed, 02 Sep 2026 09:00:00 +0000 https://badran-elshenawy.netlify.app/posts/loupe-ecosystem-post-2-loupe-browser-capabilities/ Local differential expression, Moran’s I, Visium HD segmentation, and the manual aligner. Loupe bookends your spatial pipeline rather than trailing it. The Loupe Ecosystem – Post 1: The Fastest Way to Actually Look at Your Single Cell Data https://badran-elshenawy.netlify.app/posts/loupe-ecosystem-post-1-point-and-click-eda/ Thu, 27 Aug 2026 09:00:00 +0000 https://badran-elshenawy.netlify.app/posts/loupe-ecosystem-post-1-point-and-click-eda/ Exploratory analysis is a latency problem. When a question costs 200ms instead of 90 seconds, you ask fifty instead of five.